Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm23205-201ENSMUST00000158671 103 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm9890-201ENSMUST00000171867 537 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm26460-201ENSMUST00000175061 126 ntBASIC3.62□□□□□ -1.83
Sox3P53784 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox3P53784 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
Sox3P53784 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Sox3P53784 Gm3454-201ENSMUST00000185571 412 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.62□□□□□ -1.83
Sox3P53784 Gm37319-201ENSMUST00000193500 636 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm43651-201ENSMUST00000199796 439 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm17887-201ENSMUST00000200194 547 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox3P53784 Gm43967-201ENSMUST00000203787 301 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm7443-201ENSMUST00000206355 378 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm17989-201ENSMUST00000211543 412 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.62□□□□□ -1.83
Sox3P53784 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.62□□□□□ -1.83
Sox3P53784 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.62□□□□□ -1.83
Sox3P53784 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sox3P53784 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sox3P53784 Gm23455-201ENSMUST00000083331 100 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.62□□□□□ -1.83
Sox3P53784 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sox3P53784 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.62□□□□□ -1.83
Sox3P53784 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox3P53784 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox3P53784 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox3P53784 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox3P53784 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm5943-201ENSMUST00000119458 459 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm11645-201ENSMUST00000121589 649 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm15274-201ENSMUST00000131442 291 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sox3P53784 Gm21979-201ENSMUST00000139887 291 ntBASIC3.61□□□□□ -1.83
Sox3P53784 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm15259-201ENSMUST00000151262 291 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm22011-201ENSMUST00000158790 123 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm24734-201ENSMUST00000158860 262 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm18522-201ENSMUST00000173947 650 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm24417-201ENSMUST00000178123 79 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm24653-201ENSMUST00000178541 79 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm25934-201ENSMUST00000178642 79 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox3P53784 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.61□□□□□ -1.83
Sox3P53784 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm37343-201ENSMUST00000192542 111 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm37300-201ENSMUST00000193327 280 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm44343-201ENSMUST00000196702 90 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm5309-201ENSMUST00000197416 677 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sox3P53784 Gm6240-201ENSMUST00000208014 473 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm19269-201ENSMUST00000211401 804 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm45379-201ENSMUST00000211772 549 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm21089-201ENSMUST00000215843 325 ntBASIC3.61□□□□□ -1.83
Sox3P53784 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.61□□□□□ -1.83
Sox3P53784 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.61□□□□□ -1.83
Sox3P53784 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.61□□□□□ -1.83
Sox3P53784 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox3P53784 Gm25200-201ENSMUST00000083094 130 ntBASIC3.61□□□□□ -1.83
Sox3P53784 AF357428-201ENSMUST00000083815 69 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sox3P53784 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Sox3P53784 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox3P53784 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.61□□□□□ -1.83
Sox3P53784 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox3P53784 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox3P53784 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sox3P53784 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sox3P53784 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sox3P53784 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sox3P53784 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sox3P53784 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sox3P53784 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sox3P53784 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Sox3P53784 Gm25407-201ENSMUST00000104102 134 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm23747-201ENSMUST00000104228 131 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm12467-201ENSMUST00000117625 745 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm16383-201ENSMUST00000118122 232 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm8244-201ENSMUST00000121254 264 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm7618-201ENSMUST00000121643 171 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm11344-201ENSMUST00000122011 335 ntBASIC3.6□□□□□ -1.83
Sox3P53784 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sox3P53784 Gm22693-201ENSMUST00000175049 442 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm22392-201ENSMUST00000177971 107 ntBASIC3.6□□□□□ -1.83
Sox3P53784 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.6□□□□□ -1.83
Sox3P53784 Mir6715-201ENSMUST00000184990 57 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Gm28591-201ENSMUST00000185259 183 ntBASIC3.6□□□□□ -1.83
Sox3P53784 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms