Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Shmt1P50431 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Shmt1P50431 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Shmt1P50431 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.91□□□□□ -1.62
Shmt1P50431 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Shmt1P50431 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.9□□□□□ -1.62
Shmt1P50431 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.9□□□□□ -1.62
Shmt1P50431 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.9□□□□□ -1.62
Shmt1P50431 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Shmt1P50431 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Shmt1P50431 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.9□□□□□ -1.62
Shmt1P50431 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Shmt1P50431 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
Shmt1P50431 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Shmt1P50431 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.9□□□□□ -1.62
Shmt1P50431 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
Shmt1P50431 Gm24273-201ENSMUST00000102332 164 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm24125-201ENSMUST00000104105 137 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm14163-201ENSMUST00000117342 217 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm14677-201ENSMUST00000117866 486 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm5287-201ENSMUST00000120666 598 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm13220-201ENSMUST00000121535 508 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm26352-201ENSMUST00000158223 125 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm23023-201ENSMUST00000158767 109 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm25163-201ENSMUST00000158905 104 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm21815-201ENSMUST00000178213 664 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm29552-201ENSMUST00000190548 660 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm20162-201ENSMUST00000193629 871 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm43828-201ENSMUST00000196890 639 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm24043-201ENSMUST00000083108 116 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Shmt1P50431 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Shmt1P50431 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Shmt1P50431 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Shmt1P50431 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Shmt1P50431 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Shmt1P50431 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Shmt1P50431 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Shmt1P50431 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.9□□□□□ -1.63
Shmt1P50431 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Shmt1P50431 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Shmt1P50431 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Shmt1P50431 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm22498-201ENSMUST00000104497 86 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm14304-201ENSMUST00000117272 446 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm15752-201ENSMUST00000117427 394 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm14628-201ENSMUST00000117508 635 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm11843-201ENSMUST00000118984 425 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm12837-201ENSMUST00000120131 373 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm22236-201ENSMUST00000157093 106 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm22434-201ENSMUST00000158549 122 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm16134-201ENSMUST00000161714 336 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm20543-201ENSMUST00000174200 726 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm25873-201ENSMUST00000180317 107 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm27165-201ENSMUST00000183951 232 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm33973-201ENSMUST00000195148 534 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm43856-201ENSMUST00000197004 369 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm44485-201ENSMUST00000199569 137 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm45209-201ENSMUST00000207122 353 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Olfr936-202ENSMUST00000216912 937 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Gm3565-201ENSMUST00000222670 609 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.89□□□□□ -1.63
Shmt1P50431 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Shmt1P50431 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Shmt1P50431 Gm22265-201ENSMUST00000082947 116 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.89□□□□□ -1.63
Shmt1P50431 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Shmt1P50431 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms