Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12704-201ENSMUST00000119789 464 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23463-201ENSMUST00000122468 99 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26490-201ENSMUST00000157879 140 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25459-201ENSMUST00000157953 114 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22945-201ENSMUST00000158557 157 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22991-201ENSMUST00000178126 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25754-201ENSMUST00000178653 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rfx1P48377 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm22419-201ENSMUST00000178780 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24802-201ENSMUST00000178897 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25208-201ENSMUST00000178964 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm24567-201ENSMUST00000179294 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23943-201ENSMUST00000179712 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25228-201ENSMUST00000180121 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23304-201ENSMUST00000180209 121 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm26993-201ENSMUST00000182766 789 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm27460-201ENSMUST00000184213 100 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm4321-201ENSMUST00000200520 442 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 AC115878.1-201ENSMUST00000227247 334 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm25260-201ENSMUST00000083053 134 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Gm23848-201ENSMUST00000083826 106 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.05□□□□□ -1.44
Rfx1P48377 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rfx1P48377 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Rfx1P48377 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rfx1P48377 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
Rfx1P48377 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rfx1P48377 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Rfx1P48377 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Rfx1P48377 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Rfx1P48377 Gm43260-201ENSMUST00000197378 2430 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 Mir759-201ENSMUST00000103254 98 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Rfx1P48377 Gm11673-201ENSMUST00000117846 331 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm12509-201ENSMUST00000118033 609 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm13082-201ENSMUST00000118877 561 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm13475-201ENSMUST00000119290 234 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm11904-201ENSMUST00000120562 248 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm25489-201ENSMUST00000158727 141 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC6.04□□□□□ -1.44
Rfx1P48377 Mir3095-201ENSMUST00000175552 87 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm27854-201ENSMUST00000175578 244 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm26556-201ENSMUST00000180645 320 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm28579-201ENSMUST00000186143 369 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm19641-201ENSMUST00000188432 417 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 Gm2147-201ENSMUST00000193588 639 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm10048-201ENSMUST00000194196 372 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm6510-201ENSMUST00000195916 574 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm42594-201ENSMUST00000199511 246 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.04□□□□□ -1.44
Rfx1P48377 Gm19195-201ENSMUST00000222018 511 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC6.04□□□□□ -1.44
Rfx1P48377 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Rfx1P48377 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 AC123656.2-201ENSMUST00000226726 227 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 Mir181a-2-201ENSMUST00000083489 76 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Mir338-201ENSMUST00000083666 98 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Rfx1P48377 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 Gm42910-201ENSMUST00000198917 2921 ntBASIC6.04□□□□□ -1.44
Rfx1P48377 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Rfx1P48377 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rfx1P48377 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Rfx1P48377 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Rfx1P48377 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx1P48377 Gm45555-201ENSMUST00000210028 2602 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC6.03□□□□□ -1.44
Rfx1P48377 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Rfx1P48377 Gm22592-201ENSMUST00000104242 131 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm12039-201ENSMUST00000118219 180 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm11798-201ENSMUST00000119150 421 ntBASIC6.03□□□□□ -1.44
Rfx1P48377 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.03□□□□□ -1.44
Rfx1P48377 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx1P48377 Mir3964-201ENSMUST00000174898 74 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms