Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.29□□□□□ -1.88
Cdx2P43241 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Cdx2P43241 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.29□□□□□ -1.88
Cdx2P43241 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cdx2P43241 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.29□□□□□ -1.88
Cdx2P43241 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdx2P43241 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdx2P43241 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.29□□□□□ -1.88
Cdx2P43241 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.29□□□□□ -1.88
Cdx2P43241 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdx2P43241 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.29□□□□□ -1.88
Cdx2P43241 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdx2P43241 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdx2P43241 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Cdx2P43241 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm23697-201ENSMUST00000103897 110 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm13443-201ENSMUST00000120770 555 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm23123-201ENSMUST00000157648 144 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm2389-201ENSMUST00000160487 189 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Cdx2P43241 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm27636-201ENSMUST00000184528 122 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Mir6715-201ENSMUST00000184990 57 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Mir6914-201ENSMUST00000184999 69 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm8282-201ENSMUST00000187559 483 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm43601-201ENSMUST00000196294 945 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm44845-201ENSMUST00000208773 335 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.28□□□□□ -1.88
Cdx2P43241 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Gm9370-201ENSMUST00000222787 609 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cdx2P43241 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.28□□□□□ -1.88
Cdx2P43241 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.28□□□□□ -1.88
Cdx2P43241 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cdx2P43241 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Cdx2P43241 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm25539-201ENSMUST00000116886 122 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm6893-201ENSMUST00000118385 522 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm12268-201ENSMUST00000118398 442 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm12156-201ENSMUST00000119188 554 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm24289-201ENSMUST00000157629 135 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm23591-201ENSMUST00000157663 286 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Mir6917-201ENSMUST00000184111 61 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm8502-201ENSMUST00000185708 901 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm21147-201ENSMUST00000186046 913 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm28594-201ENSMUST00000187022 661 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm38356-201ENSMUST00000194313 408 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm18384-201ENSMUST00000195974 808 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm43227-201ENSMUST00000202239 677 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Cdx2P43241 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.27□□□□□ -1.89
Cdx2P43241 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Cdx2P43241 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Cdx2P43241 Gm9427-201ENSMUST00000116187 651 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm12467-201ENSMUST00000117625 745 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm13419-201ENSMUST00000121711 271 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm3757-201ENSMUST00000125878 675 ntBASIC3.26□□□□□ -1.89
Cdx2P43241 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms