Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm25960-201ENSMUST00000175110 125 ntBASIC3.34□□□□□ -1.87
P20040 Gm44453-201ENSMUST00000175161 126 ntBASIC3.34□□□□□ -1.87
P20040 Gm25195-201ENSMUST00000177656 126 ntBASIC3.34□□□□□ -1.87
P20040 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
P20040 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.34□□□□□ -1.87
P20040 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.34□□□□□ -1.87
P20040 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.34□□□□□ -1.87
P20040 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.34□□□□□ -1.87
P20040 Gm29334-201ENSMUST00000190334 357 ntBASIC3.34□□□□□ -1.87
P20040 Gm19774-201ENSMUST00000190667 114 ntBASIC3.34□□□□□ -1.87
P20040 Gm17935-201ENSMUST00000196649 772 ntBASIC3.34□□□□□ -1.87
P20040 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.34□□□□□ -1.87
P20040 Gm45539-201ENSMUST00000210313 428 ntBASIC3.34□□□□□ -1.87
P20040 Gm25799-201ENSMUST00000082643 107 ntBASIC3.34□□□□□ -1.87
P20040 Gm23518-201ENSMUST00000082835 153 ntBASIC3.34□□□□□ -1.87
P20040 Gm25200-201ENSMUST00000083094 130 ntBASIC3.34□□□□□ -1.87
P20040 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
P20040 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
P20040 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
P20040 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
P20040 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
P20040 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
P20040 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
P20040 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
P20040 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
P20040 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.33□□□□□ -1.88
P20040 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
P20040 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
P20040 Gm23133-201ENSMUST00000104255 135 ntBASIC3.33□□□□□ -1.88
P20040 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
P20040 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
P20040 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
P20040 Gm11488-201ENSMUST00000117277 863 ntBASIC3.33□□□□□ -1.88
P20040 Gm11393-201ENSMUST00000118019 288 ntBASIC3.33□□□□□ -1.88
P20040 Gm11566-201ENSMUST00000118550 203 ntBASIC3.33□□□□□ -1.88
P20040 Gm11881-201ENSMUST00000119408 572 ntBASIC3.33□□□□□ -1.88
P20040 Gm11645-201ENSMUST00000121589 649 ntBASIC3.33□□□□□ -1.88
P20040 Gm13852-201ENSMUST00000122350 242 ntBASIC3.33□□□□□ -1.88
P20040 Gm22986-201ENSMUST00000122753 130 ntBASIC3.33□□□□□ -1.88
P20040 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
P20040 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
P20040 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
P20040 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.33□□□□□ -1.88
P20040 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
P20040 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
P20040 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Gm20773-201ENSMUST00000178940 681 ntBASIC3.33□□□□□ -1.88
P20040 Gm14527-201ENSMUST00000179300 639 ntBASIC3.33□□□□□ -1.88
P20040 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Gm10067-201ENSMUST00000179462 348 ntBASIC3.33□□□□□ -1.88
P20040 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.33□□□□□ -1.88
P20040 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
P20040 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.33□□□□□ -1.88
P20040 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.33□□□□□ -1.88
P20040 Gm21006-201ENSMUST00000196930 667 ntBASIC3.33□□□□□ -1.88
P20040 Gm44137-201ENSMUST00000203670 367 ntBASIC3.33□□□□□ -1.88
P20040 Gm44583-201ENSMUST00000207478 281 ntBASIC3.33□□□□□ -1.88
P20040 Gm45162-201ENSMUST00000209013 618 ntBASIC3.33□□□□□ -1.88
P20040 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.33□□□□□ -1.88
P20040 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.33□□□□□ -1.88
P20040 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.33□□□□□ -1.88
P20040 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.33□□□□□ -1.88
P20040 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.33□□□□□ -1.88
P20040 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.33□□□□□ -1.88
P20040 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.33□□□□□ -1.88
P20040 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.33□□□□□ -1.88
P20040 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
P20040 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
P20040 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
P20040 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.33□□□□□ -1.88
P20040 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.33□□□□□ -1.88
P20040 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.33□□□□□ -1.88
P20040 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.33□□□□□ -1.88
P20040 Gm336-201ENSMUST00000186376 1480 ntBASIC3.33□□□□□ -1.88
P20040 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.33□□□□□ -1.88
P20040 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
P20040 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
P20040 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
P20040 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
P20040 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
P20040 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
P20040 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
P20040 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.32□□□□□ -1.88
P20040 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
P20040 Gm23063-201ENSMUST00000102350 93 ntBASIC3.32□□□□□ -1.88
P20040 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
P20040 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
P20040 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.32□□□□□ -1.88
P20040 Gm11446-201ENSMUST00000121319 866 ntBASIC3.32□□□□□ -1.88
P20040 Gm13973-201ENSMUST00000121371 894 ntBASIC3.32□□□□□ -1.88
P20040 Gm11692-201ENSMUST00000122121 902 ntBASIC3.32□□□□□ -1.88
P20040 Gm23198-201ENSMUST00000158811 91 ntBASIC3.32□□□□□ -1.88
P20040 Gm10357-201ENSMUST00000159886 264 ntBASIC3.32□□□□□ -1.88
P20040 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.32□□□□□ -1.88
P20040 Gm2862-201ENSMUST00000161524 328 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms