Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm12739-201ENSMUST00000119769 382 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm12873-201ENSMUST00000119988 422 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm25047-201ENSMUST00000122667 104 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm22529-201ENSMUST00000158817 123 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm16101-201ENSMUST00000160695 430 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sdc1P18828 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sdc1P18828 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm26950-201ENSMUST00000182734 498 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm27883-201ENSMUST00000183941 102 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Mir6391-201ENSMUST00000184391 104 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm29596-201ENSMUST00000185710 385 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm29598-201ENSMUST00000188996 588 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm37603-201ENSMUST00000192368 219 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm38270-201ENSMUST00000192721 407 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm37167-201ENSMUST00000194946 396 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm42453-201ENSMUST00000200477 409 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm7443-201ENSMUST00000206355 378 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm6240-201ENSMUST00000208014 473 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Gm5338-201ENSMUST00000209530 639 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm40692-201ENSMUST00000220411 491 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Sdc1P18828 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm23518-201ENSMUST00000082835 153 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.05□□□□□ -1.92
Sdc1P18828 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Sdc1P18828 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Sdc1P18828 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sdc1P18828 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sdc1P18828 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sdc1P18828 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Sdc1P18828 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Sdc1P18828 Gm23431-201ENSMUST00000104006 107 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm23014-201ENSMUST00000104144 130 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm23532-201ENSMUST00000104569 112 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Mir294-201ENSMUST00000104710 84 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm15206-201ENSMUST00000119143 454 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm11896-201ENSMUST00000121105 820 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm12858-201ENSMUST00000121913 208 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm13852-201ENSMUST00000122350 242 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm22453-201ENSMUST00000122801 318 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm6058-201ENSMUST00000154261 399 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm25824-201ENSMUST00000157092 121 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm22890-201ENSMUST00000158642 144 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm2862-201ENSMUST00000161524 328 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm17194-201ENSMUST00000164610 348 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Sdc1P18828 Gm22398-201ENSMUST00000174941 125 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm25731-201ENSMUST00000175167 125 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Mir6996-201ENSMUST00000183922 61 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm8745-201ENSMUST00000207846 782 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm17766-201ENSMUST00000209223 442 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 Gm45814-201ENSMUST00000212646 775 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm35857-201ENSMUST00000212739 178 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm46194-201ENSMUST00000218136 320 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.04□□□□□ -1.92
Sdc1P18828 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.04□□□□□ -1.92
Sdc1P18828 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Sdc1P18828 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 AF357341-201ENSMUST00000083088 75 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm23099-201ENSMUST00000083454 139 ntBASIC3.04□□□□□ -1.92
Sdc1P18828 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Sdc1P18828 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Sdc1P18828 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Sdc1P18828 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Sdc1P18828 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.03□□□□□ -1.92
Sdc1P18828 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Sdc1P18828 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms