Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdx1P18111 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm24951-201ENSMUST00000102182 109 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Mir804-201ENSMUST00000103251 95 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Cdx1P18111 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm11432-201ENSMUST00000117334 231 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm12788-201ENSMUST00000119090 308 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm14607-201ENSMUST00000119119 491 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm15231-201ENSMUST00000119174 447 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm14303-201ENSMUST00000121320 171 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm14500-201ENSMUST00000121647 113 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm11506-201ENSMUST00000122414 470 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm22204-201ENSMUST00000122654 327 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm23591-201ENSMUST00000157663 286 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm25386-201ENSMUST00000157814 288 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm24961-201ENSMUST00000157918 184 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm17204-201ENSMUST00000167936 478 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdx1P18111 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm29588-201ENSMUST00000185738 298 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm38053-201ENSMUST00000193938 160 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm43710-201ENSMUST00000199583 452 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm43415-201ENSMUST00000201934 750 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm46190-201ENSMUST00000219650 427 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.22□□□□□ -1.89
Cdx1P18111 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Cdx1P18111 Mir383-201ENSMUST00000083523 70 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.22□□□□□ -1.89
Cdx1P18111 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cdx1P18111 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
Cdx1P18111 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Cdx1P18111 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdx1P18111 Mir291a-201ENSMUST00000104815 82 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm11698-201ENSMUST00000117948 455 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm8244-201ENSMUST00000121254 264 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm23753-201ENSMUST00000157575 149 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm24745-201ENSMUST00000157840 85 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdx1P18111 Mir5134-201ENSMUST00000175529 78 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm30280-201ENSMUST00000192214 262 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm37828-201ENSMUST00000192496 432 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm43368-201ENSMUST00000200638 409 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm4045-201ENSMUST00000204076 310 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm5338-201ENSMUST00000209530 639 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm45727-201ENSMUST00000212886 572 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.21□□□□□ -1.9
Cdx1P18111 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm19134-201ENSMUST00000221203 487 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdx1P18111 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm24950-201ENSMUST00000082768 191 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm23971-201ENSMUST00000083317 191 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm23849-201ENSMUST00000083833 191 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm26316-201ENSMUST00000083886 191 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Gm23058-201ENSMUST00000093703 107 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cdx1P18111 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cdx1P18111 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.21□□□□□ -1.9
Cdx1P18111 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Cdx1P18111 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Cdx1P18111 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Cdx1P18111 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.2□□□□□ -1.9
Cdx1P18111 Gm4736-201ENSMUST00000100870 380 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms