Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col5a1O88207 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.07□□□□□ -1.92
Col5a1O88207 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col5a1O88207 Gm22674-201ENSMUST00000104413 131 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col5a1O88207 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col5a1O88207 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.07□□□□□ -1.92
Col5a1O88207 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.07□□□□□ -1.92
Col5a1O88207 Gm7870-201ENSMUST00000184467 616 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Gm32222-201ENSMUST00000203296 298 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Gm8319-201ENSMUST00000205708 641 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Gm18602-201ENSMUST00000209794 851 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col5a1O88207 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col5a1O88207 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.07□□□□□ -1.92
Col5a1O88207 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm44220-201ENSMUST00000203784 2487 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm13761-201ENSMUST00000117238 807 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Gm12985-201ENSMUST00000118376 183 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Gm14570-201ENSMUST00000119444 391 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.06□□□□□ -1.92
Col5a1O88207 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC3.06□□□□□ -1.92
Col5a1O88207 Mir7068-201ENSMUST00000183439 74 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm30534-201ENSMUST00000217928 207 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Gm7117-201ENSMUST00000071515 387 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
Col5a1O88207 Gm336-201ENSMUST00000186376 1480 ntBASIC3.06□□□□□ -1.92
Col5a1O88207 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col5a1O88207 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm6797-201ENSMUST00000119440 512 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm23791-201ENSMUST00000122553 293 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm27893-201ENSMUST00000184408 194 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm38330-201ENSMUST00000192743 959 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm37319-201ENSMUST00000193500 636 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm24350-202ENSMUST00000198309 132 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col5a1O88207 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Gm19181-201ENSMUST00000218891 940 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col5a1O88207 Mir99a-201ENSMUST00000083596 65 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Col5a1O88207 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col5a1O88207 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.05□□□□□ -1.92
Col5a1O88207 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col5a1O88207 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms