Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11965-201ENSMUST00000122017 277 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm12998-201ENSMUST00000122445 789 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm23183-201ENSMUST00000122595 323 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm7846-201ENSMUST00000145844 274 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm25386-201ENSMUST00000157814 288 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm22501-201ENSMUST00000158981 127 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Mir6414-201ENSMUST00000183685 82 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Mir7235-201ENSMUST00000183796 56 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Mir6398-201ENSMUST00000184541 102 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm28685-201ENSMUST00000187545 1101 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm37088-201ENSMUST00000193887 406 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm45814-201ENSMUST00000212646 775 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm18016-201ENSMUST00000216119 801 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.75□□□□□ -1.97
Hmgb3O54879 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Olfr203-201ENSMUST00000089305 924 ntBASIC2.75□□□□□ -1.97
Hmgb3O54879 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Hmgb3O54879 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Hmgb3O54879 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm24541-201ENSMUST00000103871 96 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm24281-201ENSMUST00000104234 136 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Mir1198-201ENSMUST00000116995 121 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm11233-201ENSMUST00000122357 634 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm22345-201ENSMUST00000122644 107 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm19791-201ENSMUST00000180398 859 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Hmgb3O54879 Mir6921-201ENSMUST00000183719 80 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm8242-202ENSMUST00000193056 475 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm5552-201ENSMUST00000197149 515 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm42926-201ENSMUST00000200496 697 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm29884-201ENSMUST00000218403 453 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Hmgb3O54879 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Gm23455-201ENSMUST00000083331 100 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Snord15a-201ENSMUST00000083888 148 ntBASIC2.74□□□□□ -1.97
Hmgb3O54879 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Hmgb3O54879 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Hmgb3O54879 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Hmgb3O54879 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Hmgb3O54879 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Hmgb3O54879 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Hmgb3O54879 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm8807-201ENSMUST00000179328 492 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm28146-201ENSMUST00000185517 701 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm37670-201ENSMUST00000193622 229 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm37428-201ENSMUST00000193886 137 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm37490-201ENSMUST00000195566 724 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm43441-201ENSMUST00000201458 205 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.73□□□□□ -1.97
Hmgb3O54879 AC154838.1-201ENSMUST00000228944 911 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Hmgb3O54879 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Hmgb3O54879 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm44742-201ENSMUST00000207190 1412 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.73□□□□□ -1.97
Hmgb3O54879 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms