Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm22307-201ENSMUST00000180019 107 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm27875-201ENSMUST00000184425 123 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm29598-201ENSMUST00000188996 588 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm20915-201ENSMUST00000191575 663 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm37670-201ENSMUST00000193622 229 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm44371-201ENSMUST00000204148 467 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm45146-201ENSMUST00000207108 221 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm7786-201ENSMUST00000210494 436 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Mir463-201ENSMUST00000093570 75 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm43648-201ENSMUST00000197775 2485 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trav13d-3J3QMG8 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Mir582-201ENSMUST00000103758 81 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm22272-201ENSMUST00000104039 134 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm13501-201ENSMUST00000118477 979 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm13678-201ENSMUST00000118926 340 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm13064-201ENSMUST00000119125 557 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm12190-201ENSMUST00000120001 187 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm5123-201ENSMUST00000121905 837 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Snrpert-201ENSMUST00000121967 279 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm23789-201ENSMUST00000122536 301 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm5755-201ENSMUST00000152394 837 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Mir1947-201ENSMUST00000158235 85 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm25019-201ENSMUST00000179732 110 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm28263-201ENSMUST00000185884 400 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm43855-201ENSMUST00000197462 507 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm17887-201ENSMUST00000200194 547 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm44282-201ENSMUST00000203199 190 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm29817-201ENSMUST00000210098 172 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trav13d-3J3QMG8 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Trav13d-3J3QMG8 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms