Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm44041-201ENSMUST00000203678 396 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm9068-201ENSMUST00000217393 455 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Snora44-201ENSMUST00000082670 129 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm23508-201ENSMUST00000083079 72 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Pcdh1F7BJK1 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm12482-201ENSMUST00000120435 630 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm12876-201ENSMUST00000120975 408 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm14804-201ENSMUST00000122322 508 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm23669-201ENSMUST00000157470 128 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm24857-201ENSMUST00000158061 310 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm23179-201ENSMUST00000158693 304 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm27024-201ENSMUST00000182561 755 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28604-201ENSMUST00000186629 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28566-201ENSMUST00000186714 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28194-201ENSMUST00000187412 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28886-202ENSMUST00000187889 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28554-202ENSMUST00000189175 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm29376-201ENSMUST00000189357 835 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm29213-202ENSMUST00000189703 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28851-202ENSMUST00000189757 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm28461-201ENSMUST00000190023 484 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm43115-201ENSMUST00000196244 160 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm45814-201ENSMUST00000212646 775 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh1F7BJK1 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.65□□□□□ -1.66
Pcdh1F7BJK1 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Mir879-201ENSMUST00000104703 76 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm8129-201ENSMUST00000118230 213 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm15364-201ENSMUST00000119618 585 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm12704-201ENSMUST00000119789 464 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm14619-201ENSMUST00000120480 168 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm14915-201ENSMUST00000120747 204 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm13973-201ENSMUST00000121371 894 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm13745-201ENSMUST00000121994 527 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm5699-201ENSMUST00000152491 723 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm22084-201ENSMUST00000157585 105 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm26490-201ENSMUST00000157879 140 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm6632-201ENSMUST00000168425 954 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Gm17152-201ENSMUST00000172430 535 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Mir3112-201ENSMUST00000175431 82 ntBASIC4.65□□□□□ -1.67
Pcdh1F7BJK1 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms