Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm18507-201ENSMUST00000218855 525 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm22245-201ENSMUST00000082479 103 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm25799-201ENSMUST00000082643 107 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Mir34b-201ENSMUST00000083558 84 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm24273-201ENSMUST00000102332 164 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm649-201ENSMUST00000117284 1054 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm11874-201ENSMUST00000117437 130 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm13478-201ENSMUST00000118312 413 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm12252-201ENSMUST00000119517 219 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm15377-201ENSMUST00000119594 246 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm22204-201ENSMUST00000122654 327 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm22314-201ENSMUST00000158007 281 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm17194-201ENSMUST00000164610 348 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm3191-201ENSMUST00000167139 346 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Mir6907-201ENSMUST00000183764 71 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm10925-201ENSMUST00000189941 678 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm8790-201ENSMUST00000194108 322 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm43604-201ENSMUST00000199799 705 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm18327-201ENSMUST00000202426 830 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm17780-201ENSMUST00000207142 612 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm2059-201ENSMUST00000212025 287 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm16419-201ENSMUST00000221057 625 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm22304-201ENSMUST00000082688 129 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm10780-201ENSMUST00000099459 285 ntBASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm22269-201ENSMUST00000104002 130 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm12495-201ENSMUST00000119750 447 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm7363-201ENSMUST00000119883 399 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm13511-201ENSMUST00000121167 363 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm18604-201ENSMUST00000172535 558 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Mir5106-201ENSMUST00000174936 73 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Mir6996-201ENSMUST00000183922 61 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm28552-201ENSMUST00000190725 388 ntBASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb8A0A140LI48 Gm43559-201ENSMUST00000198755 466 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms