Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav4-3A0A0B4J1K1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm7853-201ENSMUST00000100708 478 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Snord14c-201ENSMUST00000101927 86 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm26376-201ENSMUST00000104784 110 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm12328-201ENSMUST00000118611 197 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Amd-ps1-201ENSMUST00000120127 994 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm11456-201ENSMUST00000121070 256 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm11414-201ENSMUST00000121795 263 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm26477-201ENSMUST00000122617 323 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm24961-201ENSMUST00000157918 184 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm24537-201ENSMUST00000157950 102 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm23773-201ENSMUST00000158985 296 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm16111-201ENSMUST00000162128 285 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm5967-201ENSMUST00000172723 494 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Mir713-201ENSMUST00000178651 108 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm11394-201ENSMUST00000181421 517 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 S100a11-ps-201ENSMUST00000181735 306 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm42621-201ENSMUST00000198114 275 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44795-201ENSMUST00000205496 319 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm45789-201ENSMUST00000213038 364 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC153852.1-201ENSMUST00000217881 567 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm5457-201ENSMUST00000022260 333 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav4-3A0A0B4J1K1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm14050-201ENSMUST00000117052 346 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm16089-201ENSMUST00000117679 336 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm11882-201ENSMUST00000121463 506 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm23213-201ENSMUST00000122715 313 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm23540-201ENSMUST00000157543 164 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm37355-201ENSMUST00000193345 606 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm37791-201ENSMUST00000195081 286 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm43104-201ENSMUST00000197234 311 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44972-201ENSMUST00000206419 406 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm44845-201ENSMUST00000208773 335 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm18850-201ENSMUST00000211578 388 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm18363-201ENSMUST00000221671 730 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm4987-201ENSMUST00000078326 408 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav4-3A0A0B4J1K1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms