Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1h3Q9Z0Y9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm25016-201ENSMUST00000158399 131 ntBASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm29791-202ENSMUST00000207888 369 ntBASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1h3Q9Z0Y9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1h3Q9Z0Y9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1h3Q9Z0Y9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm13401-201ENSMUST00000117074 291 ntBASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1h3Q9Z0Y9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm7791-201ENSMUST00000219066 539 ntBASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1h3Q9Z0Y9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Gm14859-201ENSMUST00000117752 357 ntBASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1h3Q9Z0Y9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms