Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn9Q9Z0S7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cldn9Q9Z0S7 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cldn9Q9Z0S7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cldn9Q9Z0S7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Gm12382-201ENSMUST00000122005 922 ntBASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Gm37292-201ENSMUST00000192062 758 ntBASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldn9Q9Z0S7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn9Q9Z0S7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms