Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh20Q9Z0M3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh20Q9Z0M3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh20Q9Z0M3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh20Q9Z0M3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Gm5643-201ENSMUST00000117081 966 ntBASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh20Q9Z0M3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Gm37292-201ENSMUST00000192062 758 ntBASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh20Q9Z0M3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh20Q9Z0M3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Gm12382-201ENSMUST00000122005 922 ntBASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh20Q9Z0M3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Gm15378-201ENSMUST00000121894 207 ntBASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh20Q9Z0M3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms