Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clip2Q9Z0H8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clip2Q9Z0H8 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Gm2274-201ENSMUST00000184539 609 ntBASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clip2Q9Z0H8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Gm7977-201ENSMUST00000193787 748 ntBASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Gm9731-201ENSMUST00000209480 747 ntBASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clip2Q9Z0H8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Gm18959-201ENSMUST00000208954 655 ntBASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clip2Q9Z0H8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clip2Q9Z0H8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clip2Q9Z0H8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clip2Q9Z0H8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clip2Q9Z0H8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clip2Q9Z0H8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms