Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Actl10-202ENSMUST00000226583 1501 ntBASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn8aQ9WTU3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scn8aQ9WTU3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Scn8aQ9WTU3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn8aQ9WTU3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Scn8aQ9WTU3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn8aQ9WTU3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms