Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubd1Q9R1K7 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.64■□□□□ 0.42
Tubd1Q9R1K7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tubd1Q9R1K7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tubd1Q9R1K7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Gm7791-201ENSMUST00000219066 539 ntBASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tubd1Q9R1K7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tubd1Q9R1K7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tubd1Q9R1K7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Gm37055-201ENSMUST00000191866 133 ntBASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tubd1Q9R1K7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tubd1Q9R1K7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms