Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Gm11355-201ENSMUST00000121120 306 ntBASIC20.64■□□□□ 0.89
Scn11aQ9R053 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn11aQ9R053 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn11aQ9R053 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn11aQ9R053 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn11aQ9R053 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn11aQ9R053 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn11aQ9R053 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn11aQ9R053 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.59■□□□□ 0.89
Scn11aQ9R053 Grk6-206ENSMUST00000224995 2971 ntBASIC20.59■□□□□ 0.89
Scn11aQ9R053 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Gm27357-201ENSMUST00000183754 135 ntBASIC20.59■□□□□ 0.89
Scn11aQ9R053 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn11aQ9R053 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn11aQ9R053 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Scn11aQ9R053 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn11aQ9R053 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Scn11aQ9R053 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn11aQ9R053 Gm24589-201ENSMUST00000116692 94 ntBASIC20.58■□□□□ 0.89
Scn11aQ9R053 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.58■□□□□ 0.88
Scn11aQ9R053 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Gm26039-201ENSMUST00000158152 144 ntBASIC20.57■□□□□ 0.88
Scn11aQ9R053 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.57■□□□□ 0.88
Scn11aQ9R053 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn11aQ9R053 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn11aQ9R053 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms