Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
AmfrQ9R049 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.43■□□□□ 0.7
AmfrQ9R049 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
AmfrQ9R049 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AmfrQ9R049 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AmfrQ9R049 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.42■□□□□ 0.7
AmfrQ9R049 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AmfrQ9R049 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.41■□□□□ 0.7
AmfrQ9R049 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.41■□□□□ 0.7
AmfrQ9R049 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 Gm15375-201ENSMUST00000119510 849 ntBASIC19.41■□□□□ 0.7
AmfrQ9R049 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.41■□□□□ 0.7
AmfrQ9R049 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.41■□□□□ 0.7
AmfrQ9R049 Mir6349-201ENSMUST00000184059 97 ntBASIC19.41■□□□□ 0.7
AmfrQ9R049 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.41■□□□□ 0.7
AmfrQ9R049 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.41■□□□□ 0.7
AmfrQ9R049 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
AmfrQ9R049 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AmfrQ9R049 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
AmfrQ9R049 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Gm10252-201ENSMUST00000209541 832 ntBASIC19.4■□□□□ 0.7
AmfrQ9R049 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.4■□□□□ 0.7
AmfrQ9R049 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.4■□□□□ 0.7
AmfrQ9R049 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.4■□□□□ 0.7
AmfrQ9R049 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AmfrQ9R049 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
AmfrQ9R049 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.39■□□□□ 0.7
AmfrQ9R049 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AmfrQ9R049 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
AmfrQ9R049 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AmfrQ9R049 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.38■□□□□ 0.69
AmfrQ9R049 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.38■□□□□ 0.69
AmfrQ9R049 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
AmfrQ9R049 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AmfrQ9R049 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AmfrQ9R049 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AmfrQ9R049 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
AmfrQ9R049 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AmfrQ9R049 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms