Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Il3ra-202ENSMUST00000223589 738 ntBASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx5Q9JL61 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx5Q9JL61 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Gm27463-201ENSMUST00000183569 57 ntBASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx5Q9JL61 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rfx5Q9JL61 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.31■□□□□ 0.52
Rfx5Q9JL61 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx5Q9JL61 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rfx5Q9JL61 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms