Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.06□□□□□ -0.16
Trem3Q9JKE1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Gm2399-201ENSMUST00000104944 225 ntBASIC14.06□□□□□ -0.16
Trem3Q9JKE1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Mir8112-201ENSMUST00000184382 131 ntBASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Gm7291-201ENSMUST00000199147 382 ntBASIC14.06□□□□□ -0.16
Trem3Q9JKE1 AV356131-201ENSMUST00000206201 750 ntBASIC14.06□□□□□ -0.16
Trem3Q9JKE1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trem3Q9JKE1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Gm10418-201ENSMUST00000100943 576 ntBASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trem3Q9JKE1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trem3Q9JKE1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Zfp783-201ENSMUST00000095946 670 ntBASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trem3Q9JKE1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem3Q9JKE1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem3Q9JKE1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trem3Q9JKE1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trem3Q9JKE1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem3Q9JKE1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem3Q9JKE1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms