Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cml3Q9JIY8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cml3Q9JIY8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Gm22325-201ENSMUST00000158904 308 ntBASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cml3Q9JIY8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.29□□□□□ -0.28
Cml3Q9JIY8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cml3Q9JIY8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms