Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r40Q9EQ46 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vmn1r40Q9EQ46 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vmn1r40Q9EQ46 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vmn1r40Q9EQ46 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Gm23634-201ENSMUST00000175071 91 ntBASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Mir1668-201ENSMUST00000184114 107 ntBASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vmn1r40Q9EQ46 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Gm27389-201ENSMUST00000183622 195 ntBASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vmn1r40Q9EQ46 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r40Q9EQ46 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r40Q9EQ46 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
Vmn1r40Q9EQ46 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r40Q9EQ46 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vmn1r40Q9EQ46 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vmn1r40Q9EQ46 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms