Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmgn3Q9DCB1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn3Q9DCB1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Hmgn3Q9DCB1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmgn3Q9DCB1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn3Q9DCB1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn3Q9DCB1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgn3Q9DCB1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn3Q9DCB1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn3Q9DCB1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms