Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph9Q9D9V4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph9Q9D9V4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rsph9Q9D9V4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph9Q9D9V4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rsph9Q9D9V4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rsph9Q9D9V4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rsph9Q9D9V4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph9Q9D9V4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph9Q9D9V4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph9Q9D9V4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph9Q9D9V4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rsph9Q9D9V4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rsph9Q9D9V4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rsph9Q9D9V4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Gm18959-201ENSMUST00000208954 655 ntBASIC17■□□□□ 0.31
Rsph9Q9D9V4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Gm37374-201ENSMUST00000194954 1829 ntBASIC17■□□□□ 0.31
Rsph9Q9D9V4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rsph9Q9D9V4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rsph9Q9D9V4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rsph9Q9D9V4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms