Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4cQ9D7F7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Chmp4cQ9D7F7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp4cQ9D7F7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Flg-201ENSMUST00000050758 1488 ntBASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Gm10602-201ENSMUST00000098239 609 ntBASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4cQ9D7F7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Chmp4cQ9D7F7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Gm5421-201ENSMUST00000181698 2354 ntBASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp4cQ9D7F7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Gm12933-201ENSMUST00000120203 872 ntBASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chmp4cQ9D7F7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Gm12896-201ENSMUST00000118430 226 ntBASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp4cQ9D7F7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms