Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.46■□□□□ 0.23
Upk1aQ9D132 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.46■□□□□ 0.23
Upk1aQ9D132 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Upk1aQ9D132 Gm13401-201ENSMUST00000117074 291 ntBASIC16.46■□□□□ 0.23
Upk1aQ9D132 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Upk1aQ9D132 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Upk1aQ9D132 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upk1aQ9D132 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upk1aQ9D132 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upk1aQ9D132 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Upk1aQ9D132 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Upk1aQ9D132 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.45■□□□□ 0.22
Upk1aQ9D132 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Upk1aQ9D132 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Gm26571-201ENSMUST00000181399 666 ntBASIC16.45■□□□□ 0.22
Upk1aQ9D132 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.45■□□□□ 0.22
Upk1aQ9D132 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upk1aQ9D132 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Gm10418-201ENSMUST00000100943 576 ntBASIC16.44■□□□□ 0.22
Upk1aQ9D132 Mir2861-201ENSMUST00000175539 82 ntBASIC16.44■□□□□ 0.22
Upk1aQ9D132 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.44■□□□□ 0.22
Upk1aQ9D132 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Upk1aQ9D132 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Gm10849-201ENSMUST00000100397 618 ntBASIC16.43■□□□□ 0.22
Upk1aQ9D132 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Gm6365-201ENSMUST00000054711 744 ntBASIC16.43■□□□□ 0.22
Upk1aQ9D132 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Upk1aQ9D132 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.42■□□□□ 0.22
Upk1aQ9D132 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Upk1aQ9D132 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.42■□□□□ 0.22
Upk1aQ9D132 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms