Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Gm29791-202ENSMUST00000207888 369 ntBASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Idnk-204ENSMUST00000226010 1898 ntBASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc80Q9D0F1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ndc80Q9D0F1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ndc80Q9D0F1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ndc80Q9D0F1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ndc80Q9D0F1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndc80Q9D0F1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc80Q9D0F1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc80Q9D0F1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms