Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mms19Q9D071 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mms19Q9D071 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mms19Q9D071 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Mms19Q9D071 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Mms19Q9D071 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.57■□□□□ 0.56
Mms19Q9D071 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.57■□□□□ 0.56
Mms19Q9D071 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.57■□□□□ 0.56
Mms19Q9D071 Odf3b-204ENSMUST00000227834 930 ntBASIC18.57■□□□□ 0.56
Mms19Q9D071 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mms19Q9D071 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.56■□□□□ 0.56
Mms19Q9D071 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.56■□□□□ 0.56
Mms19Q9D071 Timm23-208ENSMUST00000226683 750 ntBASIC18.56■□□□□ 0.56
Mms19Q9D071 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Mms19Q9D071 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Mms19Q9D071 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mms19Q9D071 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Mms19Q9D071 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Mms19Q9D071 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.55■□□□□ 0.56
Mms19Q9D071 Gm4974-201ENSMUST00000209974 875 ntBASIC18.55■□□□□ 0.56
Mms19Q9D071 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.55■□□□□ 0.56
Mms19Q9D071 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.55■□□□□ 0.56
Mms19Q9D071 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Mms19Q9D071 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mms19Q9D071 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Mms19Q9D071 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.54■□□□□ 0.56
Mms19Q9D071 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Mms19Q9D071 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.54■□□□□ 0.56
Mms19Q9D071 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Gm5417-201ENSMUST00000079706 384 ntBASIC18.54■□□□□ 0.56
Mms19Q9D071 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mms19Q9D071 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.53■□□□□ 0.56
Mms19Q9D071 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.53■□□□□ 0.56
Mms19Q9D071 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.53■□□□□ 0.56
Mms19Q9D071 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.53■□□□□ 0.56
Mms19Q9D071 Gm7977-201ENSMUST00000193787 748 ntBASIC18.53■□□□□ 0.56
Mms19Q9D071 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Mms19Q9D071 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mms19Q9D071 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms