Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shmt2Q9CZN7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shmt2Q9CZN7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shmt2Q9CZN7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shmt2Q9CZN7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shmt2Q9CZN7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Shmt2Q9CZN7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Gm11249-201ENSMUST00000117071 859 ntBASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shmt2Q9CZN7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Shmt2Q9CZN7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Gm18666-201ENSMUST00000190039 958 ntBASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Shmt2Q9CZN7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Gm13158-201ENSMUST00000122007 736 ntBASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Gm8520-201ENSMUST00000186517 868 ntBASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shmt2Q9CZN7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms