Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Gm18666-201ENSMUST00000190039 958 ntBASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Khdc3Q9CWU5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Khdc3Q9CWU5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Khdc3Q9CWU5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Gm10653-202ENSMUST00000139570 835 ntBASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Gm42545-201ENSMUST00000202755 922 ntBASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc3Q9CWU5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Gm11643-201ENSMUST00000119578 864 ntBASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Gm18025-201ENSMUST00000221733 862 ntBASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.63■□□□□ 0.25
Khdc3Q9CWU5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms