Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Gm12896-201ENSMUST00000118430 226 ntBASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Mtag2-201ENSMUST00000058665 714 ntBASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf135Q9CWS1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf135Q9CWS1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf135Q9CWS1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf135Q9CWS1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf135Q9CWS1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf135Q9CWS1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf135Q9CWS1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf135Q9CWS1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf135Q9CWS1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf135Q9CWS1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf135Q9CWS1 Gm10418-201ENSMUST00000100943 576 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms