Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm7Q9CQQ8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Lsm7Q9CQQ8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm7Q9CQQ8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm7Q9CQQ8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm7Q9CQQ8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm7Q9CQQ8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm7Q9CQQ8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm7Q9CQQ8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm7Q9CQQ8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Mir8112-201ENSMUST00000184382 131 ntBASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms