Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf8Q99PV0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Gm28033-201ENSMUST00000184224 96 ntBASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Gm37025-201ENSMUST00000195159 829 ntBASIC14.18□□□□□ -0.14
Prpf8Q99PV0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf8Q99PV0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 BC021767-201ENSMUST00000126387 1716 ntBASIC14.17□□□□□ -0.14
Prpf8Q99PV0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf8Q99PV0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Gm17661-201ENSMUST00000170317 270 ntBASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf8Q99PV0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Mir5130-201ENSMUST00000175160 84 ntBASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf8Q99PV0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms