Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim11Q99PQ2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim11Q99PQ2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Gm18666-201ENSMUST00000190039 958 ntBASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim11Q99PQ2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.77■□□□□ 0.76
Trim11Q99PQ2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trim11Q99PQ2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim11Q99PQ2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trim11Q99PQ2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.76■□□□□ 0.75
Trim11Q99PQ2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim11Q99PQ2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim11Q99PQ2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim11Q99PQ2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.73■□□□□ 0.75
Trim11Q99PQ2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms