Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.2■□□□□ 0.34
Trim33Q99PP7 Gm11643-201ENSMUST00000119578 864 ntBASIC17.2■□□□□ 0.34
Trim33Q99PP7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.2■□□□□ 0.34
Trim33Q99PP7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Gm37292-201ENSMUST00000192062 758 ntBASIC17.19■□□□□ 0.34
Trim33Q99PP7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim33Q99PP7 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.19■□□□□ 0.34
Trim33Q99PP7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim33Q99PP7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.18■□□□□ 0.34
Trim33Q99PP7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.18■□□□□ 0.34
Trim33Q99PP7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim33Q99PP7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Gm13401-201ENSMUST00000117074 291 ntBASIC17.17■□□□□ 0.34
Trim33Q99PP7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.17■□□□□ 0.34
Trim33Q99PP7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.17■□□□□ 0.34
Trim33Q99PP7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim33Q99PP7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim33Q99PP7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim33Q99PP7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms