Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh15Q99PJ1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.77■□□□□ 0.75
Pcdh15Q99PJ1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Gm27867-201ENSMUST00000184778 125 ntBASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdh15Q99PJ1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Gm27702-201ENSMUST00000184512 56 ntBASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh15Q99PJ1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Gm5364-201ENSMUST00000216789 889 ntBASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh15Q99PJ1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Rprl3-201ENSMUST00000157400 290 ntBASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Gm44450-201ENSMUST00000199528 114 ntBASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Gm10060-201ENSMUST00000212002 111 ntBASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh15Q99PJ1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Gm6376-201ENSMUST00000209407 580 ntBASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.72■□□□□ 0.75
Pcdh15Q99PJ1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Gm5264-201ENSMUST00000190584 848 ntBASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh15Q99PJ1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Gm8000-201ENSMUST00000188378 592 ntBASIC19.7■□□□□ 0.74
Pcdh15Q99PJ1 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms