Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf2ird2Q99NI3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.84■□□□□ 0.45
Gtf2ird2Q99NI3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gtf2ird2Q99NI3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gtf2ird2Q99NI3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gtf2ird2Q99NI3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gtf2ird2Q99NI3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Mir8112-201ENSMUST00000184382 131 ntBASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gtf2ird2Q99NI3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.8■□□□□ 0.44
Gtf2ird2Q99NI3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms