Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Gm4974-201ENSMUST00000209974 875 ntBASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr3Q99MB1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr3Q99MB1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Gm15565-201ENSMUST00000118890 427 ntBASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Gm37055-201ENSMUST00000191866 133 ntBASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr3Q99MB1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Mir1199-201ENSMUST00000117015 119 ntBASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Gm10517-202ENSMUST00000192970 758 ntBASIC18.63■□□□□ 0.57
Tlr3Q99MB1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr3Q99MB1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr3Q99MB1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr3Q99MB1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms