Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 AW822252-206ENSMUST00000208904 237 ntBASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx6-1Q99MA9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Mir8098-201ENSMUST00000184011 137 ntBASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx6-1Q99MA9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Gm13884-201ENSMUST00000118103 829 ntBASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx6-1Q99MA9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nkx6-1Q99MA9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkx6-1Q99MA9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms