Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcc1Q99LI2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcc1Q99LI2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcc1Q99LI2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Clcc1Q99LI2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clcc1Q99LI2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.14■□□□□ 0.34
Clcc1Q99LI2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clcc1Q99LI2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcc1Q99LI2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcc1Q99LI2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcc1Q99LI2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms