Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf34Q99KR6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 AV356131-201ENSMUST00000206201 750 ntBASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf34Q99KR6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf34Q99KR6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf34Q99KR6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf34Q99KR6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Gm5874-201ENSMUST00000096101 508 ntBASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf34Q99KR6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Gm7291-201ENSMUST00000199147 382 ntBASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf34Q99KR6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf34Q99KR6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf34Q99KR6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms