Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Mir8112-201ENSMUST00000184382 131 ntBASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcd2Q99JR8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd2Q99JR8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Mir770-201ENSMUST00000103252 94 ntBASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd2Q99JR8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Gm7153-201ENSMUST00000117092 455 ntBASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Mir3081-201ENSMUST00000175305 84 ntBASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd2Q99JR8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.53■□□□□ 0.4
Smarcd2Q99JR8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Gm27357-201ENSMUST00000183754 135 ntBASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd2Q99JR8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd2Q99JR8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd2Q99JR8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd2Q99JR8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd2Q99JR8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd2Q99JR8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd2Q99JR8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd2Q99JR8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd2Q99JR8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd2Q99JR8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd2Q99JR8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms