Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc4Q99J62 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc4Q99J62 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc4Q99J62 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc4Q99J62 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfc4Q99J62 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
Rfc4Q99J62 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.99■□□□□ 0.79
Rfc4Q99J62 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfc4Q99J62 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rfc4Q99J62 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Gm18958-201ENSMUST00000174258 762 ntBASIC19.97■□□□□ 0.79
Rfc4Q99J62 Mir3081-201ENSMUST00000175305 84 ntBASIC19.97■□□□□ 0.79
Rfc4Q99J62 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.97■□□□□ 0.79
Rfc4Q99J62 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.97■□□□□ 0.79
Rfc4Q99J62 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Gm10566-201ENSMUST00000086739 996 ntBASIC19.97■□□□□ 0.79
Rfc4Q99J62 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfc4Q99J62 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Gm6623-201ENSMUST00000173570 544 ntBASIC19.96■□□□□ 0.79
Rfc4Q99J62 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfc4Q99J62 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.96■□□□□ 0.79
Rfc4Q99J62 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rfc4Q99J62 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.95■□□□□ 0.78
Rfc4Q99J62 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfc4Q99J62 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms