Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.3■□□□□ 0.68
Ctu1Q99J10 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.3■□□□□ 0.68
Ctu1Q99J10 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Ctu1Q99J10 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Gm15794-201ENSMUST00000120182 631 ntBASIC19.29■□□□□ 0.68
Ctu1Q99J10 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ctu1Q99J10 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ctu1Q99J10 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ctu1Q99J10 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ctu1Q99J10 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.27■□□□□ 0.68
Ctu1Q99J10 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.27■□□□□ 0.68
Ctu1Q99J10 Mzt1-203ENSMUST00000227948 952 ntBASIC19.27■□□□□ 0.68
Ctu1Q99J10 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ctu1Q99J10 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ctu1Q99J10 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ctu1Q99J10 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ctu1Q99J10 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ctu1Q99J10 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ctu1Q99J10 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.26■□□□□ 0.67
Ctu1Q99J10 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctu1Q99J10 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.25■□□□□ 0.67
Ctu1Q99J10 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.25■□□□□ 0.67
Ctu1Q99J10 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctu1Q99J10 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.24■□□□□ 0.67
Ctu1Q99J10 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctu1Q99J10 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms