Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col20a1Q923P0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Gm27389-201ENSMUST00000183622 195 ntBASIC20.52■□□□□ 0.87
Col20a1Q923P0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.52■□□□□ 0.87
Col20a1Q923P0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col20a1Q923P0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Gm6345-202ENSMUST00000180900 204 ntBASIC20.51■□□□□ 0.87
Col20a1Q923P0 Gm21559-201ENSMUST00000220638 855 ntBASIC20.51■□□□□ 0.87
Col20a1Q923P0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col20a1Q923P0 Gm8587-201ENSMUST00000076538 843 ntBASIC20.51■□□□□ 0.87
Col20a1Q923P0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col20a1Q923P0 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.49■□□□□ 0.87
Col20a1Q923P0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.49■□□□□ 0.87
Col20a1Q923P0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col20a1Q923P0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col20a1Q923P0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.48■□□□□ 0.87
Col20a1Q923P0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col20a1Q923P0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col20a1Q923P0 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.48■□□□□ 0.87
Col20a1Q923P0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Col20a1Q923P0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.47■□□□□ 0.87
Col20a1Q923P0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col20a1Q923P0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col20a1Q923P0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col20a1Q923P0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col20a1Q923P0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col20a1Q923P0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms