Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha3Q91Y16 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdha3Q91Y16 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdha3Q91Y16 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdha3Q91Y16 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha3Q91Y16 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Gm715-201ENSMUST00000117865 831 ntBASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Gm10252-201ENSMUST00000209541 832 ntBASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdha3Q91Y16 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdha3Q91Y16 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdha3Q91Y16 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms