Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha9Q91Y11 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha9Q91Y11 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Gm3375-201ENSMUST00000203929 796 ntBASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha9Q91Y11 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdha9Q91Y11 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha9Q91Y11 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha9Q91Y11 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Gm17661-201ENSMUST00000170317 270 ntBASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdha9Q91Y11 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Gm7638-201ENSMUST00000121348 967 ntBASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha9Q91Y11 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms